This repository contains the analysis script for our study "Spatiotemporal and Genetic Cell Lineage Tracing of Endodermal Organogenesis at Single-Cell Resolution", published in Cell, 2025.
View the publication (DOI: 10.1016/j.cell.2024.12.012).
If the link above does not work, please check the URL's validity and try again. Alternatively, you can access the publication through your institution's library or contact us for assistance.
For detailed information on the analysis script and its usage, please refer to the Readme.R file included in this repository.
For analysis structure, please refer to the script_deposite.pptx file included in this repository.
The dataset is deposited GEO:
- GEO (GEO: GSE266977)
The analysis script is also deposited in Zenodo:
- Zenodo Repository (DOI: 10.5281/zenodo.14709884)
2025.01.20:
- Improved documentation and script compatibility.
2025.01.21:
- Added new Zenodo DOI.
- Removed old Zenodo DOI (10.5281/zenodo.14175949)
Li KR, Yu PL, Zheng QQ, Wang X, Fang X, Li LC, Xu CR. Spatiotemporal and genetic cell lineage tracing of endodermal organogenesis at single-cell resolution. Cell. 2025 Jan 12:S0092-8674(24)01425-9. doi: 10.1016/j.cell.2024.12.012.
For any questions or further assistance, please contact [[email protected]].